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序列格式间的转换

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Bio.SeqIO.parse() —— Bio.SeqIO.write()
from Bio import SeqIO
records = SeqIO.parse("ls_orchid.gbk", "genbank")
count = SeqIO.write(records, "my_example.fasta", "fasta")
print "Converted %i records" % count


IP属地:广东1楼2017-02-17 18:21回复
    SeqIO.convert()
    from Bio import SeqIO
    count = SeqIO.convert("ls_orchid.gbk", "genbank", "my_example.fasta", "fasta")
    print "Converted %i records" % count


    IP属地:广东2楼2017-02-17 18:24
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